新骨架重要活性天然分子的发现与功能研究

项目来源

国家自然科学基金(NSFC)

项目主持人

岳建民

项目受资助机构

中国科学院上海药物研究所

项目编号

21532007

立项年度

2015

立项时间

未公开

研究期限

未知 / 未知

项目级别

国家级

受资助金额

300.00万元

学科

化学科学-合成化学

学科代码

B-B01

基金类别

重点项目

关键词

活性筛选 ; 新骨架结构 ; 药物先导结构 ; 生物活性分子 ; 天然产物 ; Natural Products ; New carbon skeleton ; Bioactive screening ; Bioactive compounds ; Drud leads

参与者

刘群芳;魏巍;王莎莎;吴艳;范耀月;于金海;赵金鑫;王国财;周彬

参与机构

中国科学院上海研究所药物

项目标书摘要:本项目拟采用基于药用植物生源途径和结构双导向的新骨架天然活性化合物发现与研究的策略,不同于生物活性导向的研究,本策略既能显著提高发现新骨架结构的效率,也保证了发现活性化合物的几率(由于基于药用植物)。首先通过生源途径和结构双导向分析研究,从大量中草药中选定20种含有新颖结构的品种;再利用现代分离技术、波谱学、化学、药物筛选和药理学相结合对其进行深入的研究,旨在发现具有免疫抑制等活性的新类型和新骨架的化合物;对重要活性物质进行系统的结构修饰、构效关系和功能研究,最终以期发现药物先导或药物候选。研究的预期目标包括:1)获得各类化合物350-400个,其中新结构150-200个,新骨架类型的化合物15-20个;2)发现具有重要生物活性的化合物20-25个,获得药物先导化合物或药物候选1-3个,并希望能够以此阐明部分药用植物的药效物质基础;3)研究结果将在重要国际杂志上发表研究论文或申请专利。

Application Abstract: We will conduct this project to explore the biological properties,especially the immunosuppressive activity,and the underlying potential of medical application of the compounds isolated from Chinese medicinal plants,which contains structurally diverse and novel compounds based on our strategy of the biosynthesis and structure directed analysis.Our strategy is different from the bioactivity guided isolation,it not only provides a big opportunity to find compounds with new carbon skeletons,but also give high rates to hit biological compounds due to the study is based on medicinal plants.The research objectives are including:To finish the chemical study and biological tests,in particular the tests of immunosuppressive activity on 20 Chinese medicinal herbs selected to contain structurally diverse and novel compounds from a big number of TCM plants.The accomplishment of this project will lead to the isolation of 350 to 400 structurally diverse compounds,including 150 to 200 new structures,of which 15 to 20 compounds will possess new carbon skeletons;and identification 20 to 25 biologically important components.Structural modification,structure-activity relationship and an in-depth pharmaceutical study on the biologically important compounds identified in the project will be carried out,and 1 to 3 drug leads or drug candidates will be hopefully afforded subsequently.The research results will publish research papers in the international top journals,and apply patents.In addition.a number of PhD students and some of the young scientists will be trained from the successful completion of this project.

项目受资助省

上海市

项目结题报告(全文)

本项目超额完成了预定的研究任务,共对32种药用植物进行化学成分和生物活性研究,获得各类化合物780个,其中新化合物219个,新骨架化合物67个。经过生物活性筛选,发现各类活性化合物105个,包括抗疟疾、免疫抑制、抗肿瘤、逆转肿瘤耐药、抑制11β-HSD1、抗HIV、抗结核杆菌等活性,对部分化合物的药理作用机制进行了研究,以及对多个系列活性化合物的构效关系进行了总结。亮点研究成果包括:1发现强效逆转肿瘤多药耐药的新骨架环脂肽,最佳逆转率超过1000倍,并阐明其作用机制;2发现首例抗炎天然二萜维生素C缀合物,提出其生源合成途径,并完成了仿生全合成研究;3发现抑制Th17细胞分化含新氨基酸的环肽类化合物,并研究其作用机制;4发现新型抗艾滋病毒的化合物,并研究其作用机制和构效关系;5以传统用途为导向,发现系列纳摩尔级抗疟二聚倍半萜,并阐明该类化合物的构效关系;6以传统用途和生源途径为导向,发现新型抗结核杆菌单萜吲哚生物碱类系列化合物。研究结果已发表论文36篇,包括了JACS 2篇,CCS Chem 1篇,Org Lett 14篇,Science China Chem 2篇,JOC 3篇;申请发明专利4件,其中1件专利已授权。本项目基于药用植物的传统功效,采用生源合成途径和化学结构双导向的新骨架天然活性化合物发现与研究的策略,显著提高了发现新骨架结构的效率,也更大程度的提升了发现生物活性化合物的几率。

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  • 1.重要萜类化合物的发现与生源启发的全合成

    • 期刊

    <正>萜类化合物结构类型丰富,具有各类重要生物活性,作为临床药物应用的例子也很多。我们研究小组在长期研究中发现了大量的萜类化合物(包括萜类生物碱),其结构新颖多样、并普遍具有高度复杂的稠多环体系,部分化合物显示多种重要生物活性。近五年来,通过对60余种富含萜类的药用植物进行系统的化学成分研究,获得了500多个新化合物,特别是发现了多种新骨架类型和具有重要活性的天然化合物,包括抗疟疾、抗肿瘤、免疫抑制和抗艾滋病等活性等。对新骨架化合物的生源合成进行了探讨,并对其中的一些重要活性萜类衍生物进行了生源启发的全合成研究1-6。

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  • 2.Cephalodiones A-D: Compound Characterization and Semisynthesis by [6+6] Cycloaddition

    • 关键词:
    • [6+6]-cycloaddition; C-19-norditerpenoid dimers; natural products;semisynthesis; Th17 cell differentiation;NATURAL-PRODUCTS; C-2 SYMMETRY; CEPHALOTAXUS; TROPONE; NORDITERPENOIDS;HARRINGTONOLIDE; DITERPENOIDS; SKELETON; DIMERS
    • Ge, Zhan-Peng;Fan, Yao-Yue;Deng, Wen-De;Zheng, Cheng-Yu;Li, Ting;Yue, Jian-Min
    • 《ANGEWANDTE CHEMIE-INTERNATIONAL EDITION》
    • 2021年
    • 60卷
    • 17期
    • 期刊

    Cephalodiones A-D (1-4), the first example of C-19-norditerpenoid dimers, were isolated and fully characterized from a Cephalotaxus plant. These new skeletal natural products shared a unique tricyclo[6.4.1.1(2,7)]tetradeca-3,5,9,11-tetraene-13,14-dione core that was capped in both ends with rigid multicyclic ring systems either C-2-symmetrically or asymmetrically. Compounds 1-4 were proposed to be biosynthetically produced by the [6+6]-cycloaddition of two identical C-19-norditerpenoid troponoids, which was validated by the semisyntheses of dimers 2-4. Moreover, some compounds showed significant inhibition on Th17 cell differentiation.

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  • 3.Discovery of four modified classes of triterpenoids delineated a metabolic cascade: compound characterization and biomimetic synthesis

    • 关键词:
    • Cell culture;Chemical modification;Tumors;Synthetic aperture radar;Biomimetics;Biomimetic synthesis;Biosynthetic pathway;Chemical events;Cytotoxic activities;Diverse methods;Functional motifs;Structure-activity relationships;Tumor cell lines
    • Zhou, Bin;Gao, Xin-Hua;Zhang, Min-Min;Zheng, Cheng-Yu;Liu, Hong-Chun;Yue, Jian-Min
    • 《Chemical Science》
    • 2021年
    • 12卷
    • 28期
    • 期刊

    Chemical studies onDichapetalum gelonioideshave afforded 18 highly modified complex triterpenoids belonging to four compound classes as defined by the newly adapted functional motifs associated with the A ring of the molecules. Their structures were determined by solid data acquired by diverse methods. The biosynthetic pathway for the four compound classes was rationalizedviacascade modifications involving diverse chemical events. The subsequent biomimetic syntheses afforded all the desired products, including compounds16and19that were not obtained in our purification, which validated the proposed biosynthetic pathway. Besides, some compounds exhibited strong cytotoxic activities, especially2and4showed nanomolar potency against the NAMALWA tumor cell line, and a gross structure-activity relationship (SAR) of these compounds against the tested tumor cell lines was delineated.
    © The Royal Society of Chemistry 2021.

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  • 4.Diverse Diterpenoids from Microdesmis casearifolia

    • 关键词:
    • Microdesmis casearifolia; Microdesmis genus; diterpenoid; casearoids Asimilar to D; spectroscopic analysis; electronic circular dichroism(ECD) analysis;KEAYANA; DERIVATIVES; CEMBRANOLIDES; LEAVES; ROOTS; PLANT
    • Han, Guanghui;Ren, Yuhao;Fan, Yaoyue;Ji, Kailong;Zhou, Bin;Cao, Weiguo;Yue, Jianmin
    • 《CHINESE JOURNAL OF ORGANIC CHEMISTRY》
    • 2020年
    • 40卷
    • 9期
    • 期刊

    Four new diterpenoids, casearoids A similar to D (1 similar to 4), including dolabrane, orosane, labdane, and cembrane, were isolated and characterized from Aficrodesmis casearifolia. Their structures were elucidated by extensive spectroscopic data analysis. The absolute configurations of these diterpenoids were established by analysis of the electronic circular dichroism (ECD) data.

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  • 5.Limonoids from Cipadessa baccifera

    • 关键词:
    • A-D; TETRANORTRITERPENOIDS; SKELETONS; CHEMISTRY; SEEDS
    • Yu, Jin-Hai;Zhang, Hua;Zhou, Bin;Zimbres, Flavia M.;Dalal, Seema;Liu, Qun-Fang;Cassera, Maria B.;Yue, Jian-Min
    • 《JOURNAL OF NATURAL PRODUCTS》
    • 2020年
    • 83卷
    • 6期
    • 期刊

    Eighteen new limonoids, including eight methyl angolensates (1-8) and 10 cipadesins (9-18), were isolated from the leaves of Cipadessa baccifera. Their structures were characterized by means of spectroscopic data analyses, single-crystal X-ray diffraction, and quantum chemistry computational methods. The C-6 configurations in those compounds possessing a C-6 hydroxy group were all assigned as S regardless of the magnitude of J(5,6), and the C-2' configuration in those bearing a 2-methylbutyryl residue was defined by single-crystal X-ray diffraction and NMR data. Compounds 1, 5, 6, 7, 11, and 12 showed moderate antimalarial activities with IC50 values ranging from 12 to 28 mu M.

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  • 6.Crokonoids A-C, A Highly Rearranged and Dual-Bridged Spiro Diterpenoid and Two Other Diterpenoids from Croton kongensis

    • Fan, Yao-Yue;Shi, Shu-Qin;Deng, Guo-Zhen;Liu, Hong-Chun;Xu, Cheng-Hui;Ding, Jian;Wang, Guan-Wu;Yue, Jian-Min
    • 《ORGANIC LETTERS》
    • 2020年
    • 22卷
    • 3期
    • 期刊

    Crokonoid A (1), a highly rearranged diterpenoid featuring a dual-bridged tricyclo[4.4.1.1(1,4)]dodecane-2,11-dione ring system and its two possible ent-kaurene diterpenoid precursors (2 and 3), was isolated and structurally characterized by solid data from Croton kongensis. Compound 1 exhibited significant cytotoxicity against HL-60 and A-549 cell lines with IC50 values of 1.24 +/- 0.56 and 1.92 +/- 0.60 mu M, respectively.

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  • 7.Structurally Interesting Diarymethane Derivatives from Securidaca inappendiculata

    • 关键词:
    • Natural products; Diarymethane derivatives; Diarymethane derivativedimers; Structure elucidation; Antiplasmodial activity;A-C; XANTHONES; DIMERS; ROOTS; STEMS
    • Zhou, Bin;Wu, Yan;Gan, Lishe;Dalal, Seema;Cassera, Maria B.;Yue, Jianmin
    • 《CHINESE JOURNAL OF CHEMISTRY》
    • 2020年
    • 38卷
    • 8期
    • 期刊

    .Summary of main observation and conclusion Securines A-E, three dimeric diarymethane derivatives (1-3) and two enantiomeric diarymethane derivative monomers (4 and 5), were isolated and characterized from the medicinal plant Securidaca inappendiculata. Compounds 1 and 2 are a pair of enantiomeric diarymethane derivative dimers, and compound 3 is a mesomeric diarymethane derivative dimer. Their structures were determined by a combination of spectroscopic data, X-ray crystallography, electronic circular dichroism (ECD) analysis, and computational ECD calculations. Dimeric compounds 1-3 showed moderate antiplasmodial activities with IC50 values of 0.9, 1.4, and 1.5 mu M, respectively.

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  • 8.Diverse Types of Diterpenoids with an Aromatized C Ring from the Twigs of Podocarpus imbricatus

    • 《JOURNAL OF NATURAL PRODUCTS》
    • 2020年
    • 83卷
    • 8期
    • 期刊

    An ethanol extract of the powdered twigs of Podocarpus imbricatus afforded 14 new diterpenoids (1-14), which all share an aromatized C ring. These isolates belong to five diterpenoid types that include abietanes (1-3), semperviranes (4-9), totaranes (10-12), a C-17 norabietane (13), and an icetexane (14). Their structures were assigned mainly by analysis of the spectroscopic data, and the absolute configuration of 1 was determined by X-ray crystallography. A biosynthetic pathway for five of the biogenetically related types of diterpenoids was proposed. Compound 7 showed moderate inhibitory activity against Zika virus with an IC50 value of 2.5 mu M.

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  • 9.Macrocyclic Nonapeptides Incorporating Uncharacterized Amino Acids with Inhibitory Effects on Th17 Differentiation

    • 关键词:
    • natural;products;Glycosmis;pentaphylla;cyclopeptides;Th17;differentiation;inhibitors;RORγt;LBD;blockers
    • Kai-Long Ji;Yao-Yue Fan;Hio-Ha Kuok;Qun-Fang Liu;Ting Li;Jian-Min Yue
    • 《中国化学会会刊》
    • 2021年
    • 2期
    • 期刊

    Four unprecedented macrocyclic nonapeptides,orberryamides A–D(1–4),were isolated from Glycosmis pentaphylla(orangeberry)and structurally characterized by obtaining solid data from numerous analytical measurements.Co

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  • 10.Daphnillonins A and B: Alkaloids Representing Two Unknown Carbon Skeletons from Daphniphyllum longeracemosum

    • 关键词:
    • CHEMISTRY
    • Zhang, Dong-Dong;Xu, Jin-Biao;Fan, Yao-Yue;Gan, Li-She;Zhang, Hua;Yue, Jian-Min
    • 《JOURNAL OF ORGANIC CHEMISTRY》
    • 2020年
    • 85卷
    • 5期
    • 期刊

    Two highly rearranged daphniphyllum alkaloids, daphnillonins A (1) and B (2), were isolated from Daphniphyllum longeracemosum and structurally characterized by a combination of diverse methods, including the calculation of electronic circular dichroism. Compound 1 possesses an unprecedented carbon architecture with a very unique 8-methyl-6-azabicyclo[3.2.1]octane moiety, and compound 2 represents a new carbon skeleton with an uncommon 7/6/5/7/5/5-fused ring system. The biosynthetic pathways for the two alkaloids were proposed with the concurrent major alkaloids as the precursors.

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